Serveur d'exploration MERS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Determination of the human c-Abl consensus DNA binding site

Identifieur interne : 000278 ( France/Analysis ); précédent : 000277; suivant : 000279

Determination of the human c-Abl consensus DNA binding site

Auteurs : Marie-Hélène David-Cordonnier [France] ; Malika Hamdane [France] ; Christian Bailly [France] ; Jean-Claude D'Halluin [France]

Source :

RBID : ISTEX:DF35ED7E47178F4D89B17D09642A0B6C8CE8266D

English descriptors

Abstract

Abstract: c-Abl tyrosine kinase, an essential protein of the cell cycle signalling pathways, is implicated in the regulation of RNA polymerase II activity, apoptosis and DNA repair. Its DNA binding activity is important for its biological functions. However, the molecular basis of c-Abl interaction with DNA remains largely unclear. We delimited the human c-Abl DNA binding domain and identified its preferred binding site, 5′-AA/CAACAAA/C. The central AAC motif is highly conserved and constitutes the major core element in the binding sites. EMSAs and footprinting experiments were performed to explore how the c-Abl fusion protein recognizes specific sequences in DNA.

Url:
DOI: 10.1016/S0014-5793(98)00169-0


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

ISTEX:DF35ED7E47178F4D89B17D09642A0B6C8CE8266D

Le document en format XML

<record>
<TEI wicri:istexFullTextTei="biblStruct">
<teiHeader>
<fileDesc>
<titleStmt>
<title>Determination of the human c-Abl consensus DNA binding site</title>
<author>
<name sortKey="David Cordonnier, Marie Helene" sort="David Cordonnier, Marie Helene" uniqKey="David Cordonnier M" first="Marie-Hélène" last="David-Cordonnier">Marie-Hélène David-Cordonnier</name>
</author>
<author>
<name sortKey="Hamdane, Malika" sort="Hamdane, Malika" uniqKey="Hamdane M" first="Malika" last="Hamdane">Malika Hamdane</name>
</author>
<author>
<name sortKey="Bailly, Christian" sort="Bailly, Christian" uniqKey="Bailly C" first="Christian" last="Bailly">Christian Bailly</name>
</author>
<author>
<name sortKey="D Halluin, Jean Claude" sort="D Halluin, Jean Claude" uniqKey="D Halluin J" first="Jean-Claude" last="D'Halluin">Jean-Claude D'Halluin</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:DF35ED7E47178F4D89B17D09642A0B6C8CE8266D</idno>
<date when="1998" year="1998">1998</date>
<idno type="doi">10.1016/S0014-5793(98)00169-0</idno>
<idno type="url">https://api.istex.fr/ark:/67375/6H6-10DVCWBB-T/fulltext.pdf</idno>
<idno type="wicri:Area/Istex/Corpus">001059</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">001059</idno>
<idno type="wicri:Area/Istex/Curation">001059</idno>
<idno type="wicri:Area/Istex/Checkpoint">001285</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">001285</idno>
<idno type="wicri:doubleKey">0014-5793:1998:David Cordonnier M:determination:of:the</idno>
<idno type="wicri:Area/Main/Merge">003B25</idno>
<idno type="wicri:Area/Main/Curation">003A76</idno>
<idno type="wicri:Area/Main/Exploration">003A76</idno>
<idno type="wicri:Area/France/Extraction">000278</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title level="a">Determination of the human c-Abl consensus DNA binding site</title>
<author>
<name sortKey="David Cordonnier, Marie Helene" sort="David Cordonnier, Marie Helene" uniqKey="David Cordonnier M" first="Marie-Hélène" last="David-Cordonnier">Marie-Hélène David-Cordonnier</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>INSERM U 124 Onco-hématologie moléculaire, Institut de Recherches sur le Cancer de Lille, Place de Verdun, 59045 Lille</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Hauts-de-France</region>
<region type="old region" nuts="2">Nord-Pas-de-Calais</region>
<settlement type="city">Lille</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Hamdane, Malika" sort="Hamdane, Malika" uniqKey="Hamdane M" first="Malika" last="Hamdane">Malika Hamdane</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>INSERM U 124 Onco-hématologie moléculaire, Institut de Recherches sur le Cancer de Lille, Place de Verdun, 59045 Lille</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Hauts-de-France</region>
<region type="old region" nuts="2">Nord-Pas-de-Calais</region>
<settlement type="city">Lille</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Bailly, Christian" sort="Bailly, Christian" uniqKey="Bailly C" first="Christian" last="Bailly">Christian Bailly</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>INSERM U 124 Onco-hématologie moléculaire, Institut de Recherches sur le Cancer de Lille, Place de Verdun, 59045 Lille</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Hauts-de-France</region>
<region type="old region" nuts="2">Nord-Pas-de-Calais</region>
<settlement type="city">Lille</settlement>
</placeName>
</affiliation>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>Centre Oscar Lambret, Institut de Recherches sur le Cancer de Lille, Place de Verdun, 59045 Lille</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Hauts-de-France</region>
<region type="old region" nuts="2">Nord-Pas-de-Calais</region>
<settlement type="city">Lille</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="D Halluin, Jean Claude" sort="D Halluin, Jean Claude" uniqKey="D Halluin J" first="Jean-Claude" last="D'Halluin">Jean-Claude D'Halluin</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>INSERM U 124 Onco-hématologie moléculaire, Institut de Recherches sur le Cancer de Lille, Place de Verdun, 59045 Lille</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Hauts-de-France</region>
<region type="old region" nuts="2">Nord-Pas-de-Calais</region>
<settlement type="city">Lille</settlement>
</placeName>
</affiliation>
<affiliation wicri:level="1">
<country wicri:rule="url">France</country>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series>
<title level="j">FEBS Letters</title>
<title level="j" type="abbrev">FEBS</title>
<idno type="ISSN">0014-5793</idno>
<imprint>
<publisher>ELSEVIER</publisher>
<date type="published" when="1998">1998</date>
<biblScope unit="volume">424</biblScope>
<biblScope unit="issue">3</biblScope>
<biblScope unit="page" from="177">177</biblScope>
<biblScope unit="page" to="182">182</biblScope>
</imprint>
<idno type="ISSN">0014-5793</idno>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt>
<idno type="ISSN">0014-5793</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="Teeft" xml:lang="en">
<term>Actin binding site</term>
<term>Anking sequences</term>
<term>Base pairs</term>
<term>Binding activity</term>
<term>Binding capacity</term>
<term>Binding domain</term>
<term>Binding sites</term>
<term>Bold letters</term>
<term>Cell cycle</term>
<term>Clone</term>
<term>Computer programs</term>
<term>Consensus binding site</term>
<term>Consensus sequence</term>
<term>Deletion</term>
<term>Deletion mutants</term>
<term>Dnase</term>
<term>Domain</term>
<term>Feb</term>
<term>Fusion peptide</term>
<term>Fusion protein</term>
<term>Human protein</term>
<term>Kinase</term>
<term>Klenow enzyme</term>
<term>Large domain</term>
<term>Ligue nationale contre</term>
<term>Lille</term>
<term>Mouse protein</term>
<term>Mutant</term>
<term>Protein binding site</term>
<term>Secondary structure</term>
<term>Target site</term>
<term>Threonine residues</term>
<term>Tyrosine</term>
<term>Tyrosine kinase</term>
<term>Wang</term>
</keywords>
</textClass>
<langUsage>
<language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Abstract: c-Abl tyrosine kinase, an essential protein of the cell cycle signalling pathways, is implicated in the regulation of RNA polymerase II activity, apoptosis and DNA repair. Its DNA binding activity is important for its biological functions. However, the molecular basis of c-Abl interaction with DNA remains largely unclear. We delimited the human c-Abl DNA binding domain and identified its preferred binding site, 5′-AA/CAACAAA/C. The central AAC motif is highly conserved and constitutes the major core element in the binding sites. EMSAs and footprinting experiments were performed to explore how the c-Abl fusion protein recognizes specific sequences in DNA.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
</country>
<region>
<li>Hauts-de-France</li>
<li>Nord-Pas-de-Calais</li>
</region>
<settlement>
<li>Lille</li>
</settlement>
</list>
<tree>
<country name="France">
<region name="Hauts-de-France">
<name sortKey="David Cordonnier, Marie Helene" sort="David Cordonnier, Marie Helene" uniqKey="David Cordonnier M" first="Marie-Hélène" last="David-Cordonnier">Marie-Hélène David-Cordonnier</name>
</region>
<name sortKey="Bailly, Christian" sort="Bailly, Christian" uniqKey="Bailly C" first="Christian" last="Bailly">Christian Bailly</name>
<name sortKey="Bailly, Christian" sort="Bailly, Christian" uniqKey="Bailly C" first="Christian" last="Bailly">Christian Bailly</name>
<name sortKey="D Halluin, Jean Claude" sort="D Halluin, Jean Claude" uniqKey="D Halluin J" first="Jean-Claude" last="D'Halluin">Jean-Claude D'Halluin</name>
<name sortKey="D Halluin, Jean Claude" sort="D Halluin, Jean Claude" uniqKey="D Halluin J" first="Jean-Claude" last="D'Halluin">Jean-Claude D'Halluin</name>
<name sortKey="Hamdane, Malika" sort="Hamdane, Malika" uniqKey="Hamdane M" first="Malika" last="Hamdane">Malika Hamdane</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000278 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000278 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    MersV1
   |flux=    France
   |étape=   Analysis
   |type=    RBID
   |clé=     ISTEX:DF35ED7E47178F4D89B17D09642A0B6C8CE8266D
   |texte=   Determination of the human c-Abl consensus DNA binding site
}}

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Mon Apr 20 23:26:43 2020. Site generation: Sat Mar 27 09:06:09 2021